STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rbx1E3 ubiquitin-protein ligase RBX1. (108 aa)    
Predicted Functional Partners:
Skp1a
S-phase kinase-associated protein 1.
   
 0.999
Cul2
Cullin-2 isoform X1.
    
 0.999
Cul3
Cullin-3 isoform X1.
    
 0.999
Cul1
Cullin 1.
    
 0.999
Cul5
Cullin 5.
    
 0.998
Ddb1
DNA damage-binding protein 1.
    
 0.998
Cul4b
Cullin-4B isoform X1.
    
 0.997
Cul4a
Cullin-4A.
    
 0.997
Elob
Elongin-B.
   
 0.996
Skp2
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2).
    
 0.996
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.