STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Srrm3Serine/arginine repetitive matrix protein 3. (647 aa)    
Predicted Functional Partners:
Cwc22
Pre-mRNA-splicing factor CWC22 homolog.
    
 0.925
Cdc40
Pre-mRNA-processing factor 17 isoform X1.
   
 0.923
Dhx38
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16.
    
 0.910
Syf2
Pre-mRNA-splicing factor SYF2.
    
 0.907
Cwc25
Pre-mRNA-splicing factor CWC25 homolog.
   
 0.901
Srrm1
Serine/arginine repetitive matrix protein 1 isoform X1.
   
 0.894
Slu7
Pre-mRNA-processing factor SLU7.
    
 0.891
Yju2
Coiled-coil domain-containing protein 94.
   
 0.890
Snrpf
Small nuclear ribonucleoprotein F.
    
 0.873
Cdc5l
Cell division cycle 5-like protein.
   
 
 0.870
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.