STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppp1r13lRelA-associated inhibitor. (823 aa)    
Predicted Functional Partners:
Ppp1ca
Serine/threonine-protein phosphatase PP1-alpha catalytic subunit.
   
 
 0.968
Tp53
Cellular tumor antigen p53 isoform X1.
    
 0.966
Trp73
Tumor protein p73 isoform X1.
    
 0.865
Trp63
Tumor protein 63 isoform X1.
    
 0.810
Hif1an
Hypoxia-inducible factor 1-alpha inhibitor (HIF hydroxylase).
    
   0.731
Ifnar2
Interferon alpha/beta receptor 2.
   
 0.629
Rela
Transcription factor p65.
   
 
 0.613
Ppp1cc
Serine/threonine-protein phosphatase PP1-gamma catalytic subunit.
   
 
 0.601
Keap1
Kelch-like ECH-associated protein 1.
    
 
 0.582
Ifnb1
Interferon beta.
   
 0.579
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.