STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Spata4Spermatogenesis-associated protein 4. (296 aa)    
Predicted Functional Partners:
Spata17
LOW QUALITY PROTEIN: spermatogenesis-associated protein 17.
   
  
 0.546
Mycbp
C-Myc-binding protein.
    
   0.536
Pgk2
Phosphoglycerate kinase 2.
   
 
 0.516
Taf5l
TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L.
    
   0.502
Cfap20
Cilia- and flagella-associated protein 20.
    
   0.502
Taf5
Transcription initiation factor TFIID subunit 5 isoform X1.
    
   0.502
4930452B06Rik
Uncharacterized protein C3orf67 homolog.
    
   0.502
Fank1
Fibronectin type 3 and ankyrin repeat domains protein 1.
   
 
 0.496
Pgk1
Phosphoglycerate kinase 1.
   
 
 0.495
Mycbpap
MYCBP-associated protein.
   
 
 0.482
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.