STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMUGP00000002001NSFL1 cofactor p47-like. (99 aa)    
Predicted Functional Partners:
ENSMUGP00000032429
UBX domain-containing protein 7.
    
 
 0.801
ENSMUGP00000032499
annotation not available
    
 
 0.801
Vcp
Transitional endoplasmic reticulum ATPase.
   
 0.799
Yod1
Ubiquitin thioesterase OTU1.
   
 
 0.785
Plaa
Phospholipase A2, activating protein.
    
 
 0.784
Derl1
Derlin-1.
    
 
 0.765
Spata5l1
Spermatogenesis-associated protein 5-like protein 1 isoform X1.
   
 0.745
Spata5
Spermatogenesis-associated protein 5 isoform X1.
   
 0.745
Aspscr1
Tether containing UBX domain for GLUT4 isoform X1.
    
 
 0.699
Ufd1
Ubiquitin recognition factor in ER-associated degradation protein 1 isoform X1.
   
 
 0.689
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.