STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mageb18Melanoma-associated antigen B18-like. (326 aa)    
Predicted Functional Partners:
Lnx1
E3 ubiquitin-protein ligase LNX.
   
 
 0.747
Nsmce1
Non-structural maintenance of chromosomes element 1 homolog.
    
 0.655
Nsmce4a
Non-structural maintenance of chromosomes element 4 homolog A.
   
 0.646
Smc6
Structural maintenance of chromosomes protein 6.
   
 0.616
Smc5
Structural maintenance of chromosomes protein 5 isoform X1.
   
 0.615
Nsmce2
NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase.
    
 0.609
Zfp157
KRAB domain-containing zinc finger protein.
    
 
 0.573
Fam174b
Membrane protein FAM174B.
      
 0.572
Eid3
EP300-interacting inhibitor of differentiation 3.
   
 0.560
Vsig1
V-set and immunoglobulin domain containing 1.
      
 0.535
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.