STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cdh6Cadherin 6, type 2, K-cadherin. (790 aa)    
Predicted Functional Partners:
Ctnna1
Catenin alpha-1.
    
 0.646
Ctnnb1
Catenin (cadherin associated protein), beta 1.
    
 0.565
Cdh3
Cadherin 3, type 1, P-cadherin.
  
  
0.541
Jup
Junction plakoglobin.
    
 0.506
Cdh2
Cadherin 2, type 1, N-cadherin.
  
  
0.502
Ctnnd1
Catenin (cadherin-associated protein), delta 1.
   
 0.486
Cdh11
Cadherin 11, type 2, OB-cadherin.
  
  
0.470
Gars
Glycyl-tRNA synthetase.
      
 0.467
Brinp2
BMP/retinoic acid-inducible neural-specific protein 2.
  
  
 0.450
Gabarap
Gamma-aminobutyric acid receptor-associated protein.
      
 0.445
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.