STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dhx9ATP-dependent RNA helicase A isoform X1. (1385 aa)    
Predicted Functional Partners:
Ddx5
Probable ATP-dependent RNA helicase DDX5.
   
 0.977
Alyref
THO complex subunit 4.
   
 0.906
Rbm7
RNA-binding protein 7 isoform X1.
    
 0.902
Cdc40
Pre-mRNA-processing factor 17 isoform X1.
   
 0.897
Myd88
Myeloid differentiation primary response gene 88.
   
 0.895
Rbm5
RNA-binding protein 5/10.
   
 0.889
Ddx17
Probable ATP-dependent RNA helicase DDX17 isoform X1.
   
 0.882
Ago2
Eukaryotic translation initiation factor 2C.
   
 
 0.880
Ewsr1
RNA-binding protein EWS isoform X1.
   
 
 0.875
Srrt
Serrate RNA effector molecule homolog isoform X1.
   
 0.871
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.