STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Surf4ER-derived vesicles protein. (336 aa)    
Predicted Functional Partners:
Tmed10
Transmembrane emp24 domain-containing protein 10.
   
 0.859
Gorasp2
Golgi reassembly-stacking protein 2.
   
  
 0.823
ENSMUGP00000000365
annotation not available
    
 
 0.784
Gosr1
Golgi SNAP receptor complex member 1 isoform X1.
    
 
 0.784
Tmed2
Transmembrane emp24 domain-containing protein 2.
   
 0.766
ENSMUGP00000007358
annotation not available
   
 0.766
Copa
Coatomer subunit alpha isoform X1.
   
 
 0.749
Tmed9
Transmembrane emp24 domain-containing protein 9.
   
 0.734
Copb2
Coatomer subunit beta.
   
  0.722
Tmed4
Transmembrane emp24 domain-containing protein 4.
   
 0.721
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.