STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMUGP00000005259annotation not available (201 aa)    
Predicted Functional Partners:
Cog8
Conserved oligomeric Golgi complex subunit 8.
   
 0.787
Sys1
Protein SYS1 homolog isoform X1.
   
 
 0.752
Ric1
RAB6A-GEF complex partner protein 1 isoform X1.
    
 0.681
Arl3
ADP-ribosylation factor-like protein 3.
   
0.634
Vps53
Vacuolar protein sorting-associated protein 53 homolog.
     
 0.629
Stx16
Syntaxin-16 isoform X1.
    
 0.619
Rab6a
Ras-related protein Rab-6A isoform X1.
    
 0.616
Rab6b
RAB6B, member RAS oncogene family.
    
 0.616
Pde6d
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta.
     
 0.613
Vps52
Vacuolar protein sorting-associated protein 52 homolog.
   
 0.601
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.