STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bhlha9Class A basic helix-loop-helix protein 9. (223 aa)    
Predicted Functional Partners:
Ascl5
Achaete-scute complex protein.
      
 0.559
Trarg1
Tumor suppressor candidate 5.
      
 0.554
Hils1
Spermatid-specific linker histone H1-like protein.
      
 0.505
H1f10
Histone H1/5.
      
 0.446
H1f1
Histone H1.1.
      
 0.445
4930579G24Rik
Renal cancer differentiation gene 1 protein.
      
 0.414
ENSMUGP00000000048
Class B basic helix-loop-helix protein 4/5.
      
 0.408
H1f2
Histone H1.2 isoform X1.
      
 0.408
ENSMUGP00000007031
annotation not available
      
 0.408
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.