STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AtmSerine-protein kinase ATM. (2926 aa)    
Predicted Functional Partners:
Nbn
Nibrin.
    
 0.998
Tp53
Cellular tumor antigen p53 isoform X1.
   
 0.996
Mre11a
Double-strand break repair protein MRE11 isoform X1.
   
 0.996
Chek2
Serine/threonine-protein kinase CHEK2.
    
 0.995
Rad50
DNA repair protein RAD50 isoform X1.
   
 0.995
Atr
Serine/threonine-protein kinase ATR.
   
0.991
Brca1
Breast cancer type 1 susceptibility protein isoform X1.
    
 0.991
Wrn
Werner syndrome ATP-dependent helicase.
   
 0.978
Chek1
Serine/threonine-protein kinase CHEK1.
    
 0.973
Sqstm1
Sequestosome-1 isoform X1.
     
 0.961
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.