STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Thumpd1THUMP domain-containing protein 1. (353 aa)    
Predicted Functional Partners:
ENSMUGP00000030228
annotation not available
   
 0.755
ENSMUGP00000030636
RNA cytidine acetyltransferase.
   
 0.755
Fdxacb1
Ferredoxin-fold anticodon-binding domain-containing protein 1.
   
 
 0.625
Dkc1
H/ACA ribonucleoprotein complex subunit 4.
   
 
 0.571
Trmt1
TRNA (guanine(26)-N(2))-dimethyltransferase isoform X1.
    
 
 0.566
Trmt1l
TRMT1-like protein isoform X1.
    
 
 0.566
Dus2
TRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1.
   
 
 0.514
ENSMUGP00000027582
annotation not available
   
 
 0.514
Nsmce1
Non-structural maintenance of chromosomes element 1 homolog.
      
 0.505
Pus1
TRNA pseudouridine synthase A, mitochondrial isoform X1.
   
 
 0.475
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.