STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mrpl1839S ribosomal protein L18, mitochondrial isoform X1. (180 aa)    
Predicted Functional Partners:
Mrps30
Mitochondrial ribosomal protein S30.
   
   0.930
Mrpl58
Peptidyl-tRNA hydrolase ICT1, mitochondrial isoform X1.
   
   0.925
Mrpl40
39S ribosomal protein L40, mitochondrial.
   
   0.904
Mrpl44
39S ribosomal protein L44, mitochondrial.
   
 
 0.898
Mrps10
28S ribosomal protein S10, mitochondrial.
   
 
 0.891
Mrpl4
39S ribosomal protein L4, mitochondrial.
   
   0.878
Mrps25
28S ribosomal protein S25, mitochondrial.
   
 
 0.873
ENSMUGP00000014597
annotation not available
   
 
 0.869
Mrpl38
39S ribosomal protein L38, mitochondrial.
   
 
 0.863
Mrpl20
39S ribosomal protein L20, mitochondrial.
   
   0.863
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.