STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pcdh1Protocadherin delta 1. (1237 aa)    
Predicted Functional Partners:
Ctnna1
Catenin alpha-1.
    
 0.522
Mpdz
Multiple PDZ domain protein isoform X1.
    
 
 0.456
Lin7a
Protein lin-7 homolog A.
      
 0.454
Itgb3
Integrin beta 3.
    
 0.442
Vezt
Vezatin isoform X1.
    
 
 0.438
Mgat5b
Mannosyl alpha-1,6-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B.
    
 0.423
Lhfpl2
Lipoma HMGIC fusion partner-like 2 protein.
    
  0.416
Tjp2
Tight junction protein ZO-2 isoform X1.
    
 0.413
Jup
Junction plakoglobin.
    
 0.412
Sec1
Galactoside 2-alpha-L-fucosyltransferase 3-like.
      
 0.404
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.