STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMUGP00000009789Nuclear pore complex protein Nup62. (521 aa)    
Predicted Functional Partners:
Nup54
Nuclear pore complex protein Nup54.
   
 0.999
Nup58
Nucleoporin p58/p45 isoform X1.
   
0.997
Ranbp2
E3 SUMO-protein ligase RanBP2 isoform X1.
   
 0.962
Nup214
Nuclear pore complex protein Nup214 isoform X1.
   
 0.950
Nup98
Nuclear pore complex protein Nup98-Nup96 isoform X1.
   
 0.947
Nup107
Nuclear pore complex protein Nup107 isoform X1.
   
 0.944
Nup155
Nuclear pore complex protein Nup155 isoform X1.
   
 0.942
Nup205
Nuclear pore complex protein Nup205 isoform X1.
   
 0.941
Nup88
Nuclear pore complex protein Nup88.
    
 0.937
Nup133
Nuclear pore complex protein Nup133.
   
 0.931
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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