STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbc1d16TBC1 domain family member 16 isoform X1. (766 aa)    
Predicted Functional Partners:
Rab4a
Ras-related protein Rab-4A.
    
 0.879
Rab4b
Ras-related protein Rab-4B.
    
 0.636
B3gnt8
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8.
      
 0.570
Wdfy4
WD repeat- and FYVE domain-containing protein 4 isoform X1.
      
 0.538
Dipk1a
Protein FAM69A.
      
 0.537
Hic2
Hypermethylated in cancer 2 protein.
      
 0.529
Tex2
Testis-expressed protein 2 isoform X1.
      
 0.515
Vsig2
V-set and immunoglobulin domain-containing protein 2.
      
 0.502
Rnase11
Probable ribonuclease 11.
      
 0.483
Tbc1d20
TBC1 domain family member 20.
      
 0.463
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.