STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmc8Transmembrane channel-like protein 8 isoform X1. (720 aa)    
Predicted Functional Partners:
Slc30a1
Solute carrier family 30 (zinc transporter), member 1.
      
 0.754
Cnih1
Cornichon family AMPA receptor auxiliary protein 1.
    
 0.539
Syngr2
Synaptogyrin-2 isoform X1.
 
    
 0.518
Wnt11
Wingless-type MMTV integration site family, member 11.
   
 
 0.481
Tfcp2
Alpha-globin transcription factor CP2 isoform X1.
    
 
 0.471
Skiv2l
Antiviral helicase SKI2.
    
 
 0.444
Idua
Alpha-L-iduronidase isoform X1.
    
 
 0.441
Kcng4
Potassium voltage-gated channel subfamily G member 4.
    
 
 0.436
Il1a
Interleukin 1 alpha.
     
 0.420
Bfsp2
Phakinin isoform X1.
   
 0.403
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.