STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Atxn1Ataxin 1/1L. (790 aa)    
Predicted Functional Partners:
Rbpj
Recombining binding protein suppressor of hairless isoform X1.
    
 0.943
ENSMUGP00000026967
Ataxin-1-like.
    
0.936
Kat5
Histone acetyltransferase KAT5 isoform X1.
   
 0.913
Rbpjl
Recombining binding protein suppressor of hairless-like protein.
    
 0.913
Pum1
Pumilio homolog 1 isoform X1.
     
 0.911
Cic
Protein capicua homolog isoform X1.
    
 
 0.911
Atxn2
Ataxin 2/2L.
   
 
 0.803
Ncor2
Nuclear receptor co-repressor 2.
    
 
 0.792
Ubqln4
Ubiquilin-4 isoform X1.
    
 
 0.787
Rbm17
Splicing factor 45.
    
 
 0.739
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.