STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ptx3Pentraxin-related protein PTX3. (381 aa)    
Predicted Functional Partners:
ENSMUGP00000023246
Tumor necrosis factor-inducible gene 6 protein.
   
 
 0.793
ENSMUGP00000023259
annotation not available
   
 
 0.793
Fgf2
Fibroblast growth factor 2.
    
 
 0.762
Mbl2
Mannose-binding protein C-like.
   
 
 0.761
Mbl1
Mannose-binding protein A-like.
   
 
 0.758
Selp
P-selectin isoform X1.
   
 
 0.710
Fcnb
Ficolin-1.
    
 
 0.707
Il6
Interleukin 6.
   
  
 0.661
Fgf10
Fibroblast growth factor 10.
    
 
 0.616
Fgf8
Fibroblast growth factor 8 isoform X1.
    
 
 0.609
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.