STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trim45Tripartite motif-containing protein 45. (579 aa)    
Predicted Functional Partners:
Tmem150a
Transmembrane protein 150A.
   
  
 0.517
Stac
SH3 and cysteine-rich domain-containing protein isoform X1.
    
 
 0.449
March4
E3 ubiquitin-protein ligase MARCH4/9/11.
      
 0.446
Rnf182
E3 ubiquitin-protein ligase RNF182.
      
 0.443
Sorbs1
Sorbin and SH3 domain containing 1.
    
 
 0.436
Usp32
Ubiquitin carboxyl-terminal hydrolase 32 isoform X1.
    
 
 0.431
Ubb
Polyubiquitin-B.
   
 0.422
Fchsd2
F-BAR and double SH3 domains protein 2 isoform X1.
    
 
 0.419
Rpl35
Large subunit ribosomal protein L35e.
    
 
 0.417
Spg20
Spartin isoform X1.
      
 0.416
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.