STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcn2Neutrophil gelatinase-associated lipocalin. (198 aa)    
Predicted Functional Partners:
Slc22a17
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 17.
    
 0.925
Ltf
Lactotransferrin.
   
 
 0.899
Mmp9
Matrix metalloproteinase-9 (gelatinase B).
   
 0.895
Hamp
Hepcidin.
   
 
 0.876
Ctla4
Cytotoxic T-lymphocyte protein 4 isoform X1.
    
 
 0.792
App
Amyloid beta A4 protein isoform X1.
   
 0.757
Fn1
Fibronectin isoform X1.
    
 
 0.747
Havcr1
Hepatitis A virus cellular receptor 1.
      
 0.732
Slc3a2
4F2 cell-surface antigen heavy chain.
    
   0.731
Lrp2
Low-density lipoprotein receptor-related protein 2.
      
 0.725
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.