STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMUGP00000018702annotation not available (148 aa)    
Predicted Functional Partners:
Sf3a3
Splicing factor 3A subunit 3.
   
 0.895
Snrpf
Small nuclear ribonucleoprotein F.
   
 0.883
Sf3a1
Splicing factor 3A subunit 1.
   
 0.870
Sf3b3
Splicing factor 3B subunit 3.
    
 0.868
Sf3b2
Splicing factor 3B subunit 2.
   
 0.866
Sf3b4
Splicing factor 3B subunit 4.
    
 0.860
Sf3a2
Splicing factor 3A subunit 2.
    
 0.847
Ddx46
Probable ATP-dependent RNA helicase DDX46.
    
 0.826
Sf3b5
Splicing factor 3B subunit 5.
   
 0.821
U2af2
U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2.
   
 
 0.810
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.