STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwc22Pre-mRNA-splicing factor CWC22 homolog. (895 aa)    
Predicted Functional Partners:
Cdc40
Pre-mRNA-processing factor 17 isoform X1.
   
 0.995
Eif4a3
Eukaryotic initiation factor 4A-III.
    
 0.995
Slu7
Pre-mRNA-processing factor SLU7.
   
 0.993
Dhx38
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16.
   
 0.993
Yju2
Coiled-coil domain-containing protein 94.
    
 0.985
Cdc5l
Cell division cycle 5-like protein.
   
 
 0.980
ENSMUGP00000028624
annotation not available
   
 
 0.978
Eftud2
116 kDa U5 small nuclear ribonucleoprotein component.
   
 
 0.977
Snrnp200
U5 small nuclear ribonucleoprotein 200 kDa helicase.
    
 
 0.973
Prpf19
Pre-mRNA-processing factor 19 isoform X1.
   
 
 0.973
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.