STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SmtnSmoothelin isoform X1. (955 aa)    
Predicted Functional Partners:
Cerk
Ceramide kinase.
      
 0.479
Myh11
Myosin heavy chain 9/10/11/14.
   
 
 0.457
Camkk1
Calcium/calmodulin-dependent protein kinase kinase 1.
      
 0.455
Cnn1
Calponin 1.
   
  
 0.451
Cnn2
Calponin-2.
   
  
 0.440
Tagln
Transgelin.
   
  
 0.439
Adgra3
Adhesion G protein-coupled receptor A3 isoform X1.
      
 0.434
ENSMUGP00000025695
annotation not available
   
  
 0.423
ENSMUGP00000024492
Tumor necrosis factor receptor superfamily member 26-like isoform X1.
      
 0.408
ENSMUGP00000024515
Tumor necrosis factor receptor superfamily member 22-like.
      
 0.408
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.