STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMUGP00000023756Transportin-1 isoform X1. (898 aa)    
Predicted Functional Partners:
Hnrnpa1
Heterogeneous nuclear ribonucleoprotein A1 isoform X1.
   
 
 0.861
Ran
GTP-binding nuclear protein Ran.
   
 0.842
Kif17
Kinesin-like protein KIF17 isoform X1.
    
 0.819
Fus
RNA-binding protein FUS isoform X1.
   
 
 0.812
Hnrnpd
Heterogeneous nuclear ribonucleoprotein D0 isoform X1.
   
 
 0.784
Hnrnpm
Heterogeneous nuclear ribonucleoprotein M isoform X1.
   
 
 0.755
1700009N14Rik
GTP-binding nuclear protein Ran-like.
   
 0.720
Bap1
Ubiquitin carboxyl-terminal hydrolase BAP1 isoform X1.
    
   0.706
Zc3h14
Zinc finger CCCH domain-containing protein 14 isoform X1.
    
 
 0.700
Nup153
Nuclear pore complex protein Nup153.
   
 
 0.682
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.