STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ShpkSedoheptulokinase. (476 aa)    
Predicted Functional Partners:
Spata22
Spermatogenesis-associated protein 22.
      
 0.846
Psmd6
26S proteasome non-ATPase regulatory subunit 6.
   
 0.783
Trpv3
Transient receptor potential cation channel subfamily V member 3 isoform X1.
 
    
 0.782
Gpd2
Glycerol-3-phosphate dehydrogenase, mitochondrial.
  
 0.774
Psmd12
26S proteasome non-ATPase regulatory subunit 12.
   
 0.767
Spata3
Spermatogenesis-associated protein 3.
   
  
 0.764
Psmd11
26S proteasome non-ATPase regulatory subunit 11.
   
 0.763
Psmd2
26S proteasome non-ATPase regulatory subunit 2.
   
 0.760
Psmd4
26S proteasome non-ATPase regulatory subunit 4 isoform X1.
   
 0.759
Psmd13
26S proteasome non-ATPase regulatory subunit 13.
   
 0.758
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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