STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ddx18ATP-dependent RNA helicase DDX18/HAS1. (662 aa)    
Predicted Functional Partners:
Pes1
Pescadillo homolog.
   
 0.996
Rsl1d1
Ribosomal L1 domain-containing protein 1.
   
 
 0.996
Nifk
MKI67 FHA domain-interacting nucleolar phosphoprotein.
   
 
 0.995
Wdr12
Ribosome biogenesis protein WDR12.
   
 0.995
Gtpbp4
Nucleolar GTP-binding protein 1 isoform X1.
   
 
 0.995
Wdr74
Ribosome biogenesis protein NSA1.
   
 
 0.993
Noc2l
Nucleolar complex protein 2 homolog.
   
 
 0.993
Bms1
Ribosome biogenesis protein BMS1 homolog.
   
 
 0.993
Pwp2
Periodic tryptophan protein 2 homolog.
   
 
 0.993
Ddx10
Probable ATP-dependent RNA helicase DDX10.
  
  
0.991
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.