STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hic1Hypermethylated in cancer 1 protein isoform X1. (732 aa)    
Predicted Functional Partners:
Ctbp1
C-terminal-binding protein 1 isoform X1.
    
 
 0.713
Sirt1
NAD+-dependent protein deacetylase sirtuin 1.
    
 
 0.707
Ctbp2
C-terminal-binding protein 2 isoform X1.
    
 
 0.666
Dnmt1
DNA (cytosine-5)-methyltransferase 1.
   
 0.589
Spz1
Spermatogenic leucine zipper protein 1.
    
 0.569
Rassf1
Ras association domain-containing protein 1 isoform X1.
      
 0.562
Ctnnb1
Catenin (cadherin associated protein), beta 1.
    
 0.559
Nhlh1
Nescient helix-loop-helix protein.
   
 
 0.548
Pcsk9
Proprotein convertase subtilisin/kexin type 9.
      
 0.531
Fgf21
Fibroblast growth factor 21.
    
 0.522
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.