STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sqstm1Sequestosome-1 isoform X1. (442 aa)    
Predicted Functional Partners:
Traf6
TNF receptor-associated factor 6.
    
 0.999
Keap1
Kelch-like ECH-associated protein 1.
    
 0.998
Prkcz
Protein kinase C zeta type isoform X1.
    
 0.995
Map1lc3a
Microtubule-associated proteins 1A/1B light chain 3A.
   
 0.995
Gabarap
Gamma-aminobutyric acid receptor-associated protein.
   
 0.993
Map1lc3b
Microtubule-associated proteins 1A/1B light chain 3B.
   
 0.991
ENSMUGP00000023051
annotation not available
   
 0.991
ENSMUGP00000023061
annotation not available
   
 0.991
Cyld
Ubiquitin carboxyl-terminal hydrolase CYLD.
    
 0.983
Gabarapl1
Gamma-aminobutyric acid receptor-associated protein-like 1.
   
 0.982
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.