STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Jph4Junctophilin-4. (626 aa)    
Predicted Functional Partners:
Cacna1s
Voltage-dependent L-type calcium channel subunit alpha-1S.
   
 
 0.808
Asph
Aspartyl/asparaginyl beta-hydroxylase isoform X1.
   
  
 0.690
Sypl2
Synaptophysin-like protein 2.
   
  
 0.647
ENSMUGP00000013496
annotation not available
   
 
 0.641
Cacna1d
Voltage-dependent L-type calcium channel subunit alpha-1D.
   
 
 0.591
Stim1
Stromal interaction molecule 1 isoform X1.
    
 
 0.572
Rabgef1
Rab5 GDP/GTP exchange factor isoform X1.
    
 0.532
Calml4
Calmodulin-like protein 4 isoform X1.
    
 
 0.514
Ryr3
Ryanodine receptor 3.
   
 
 0.504
Calml3
Calmodulin-like protein 3.
   
 
 0.500
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.