STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zc2hc1bZinc finger C2HC domain-containing protein 1B. (173 aa)    
Predicted Functional Partners:
Fam163b
Protein FAM163B.
      
 0.722
Sec22c
SEC22 vesicle trafficking protein A/C.
      
 0.623
Zdhhc22
Palmitoyltransferase ZDHHC22.
      
 0.611
Castor1
Cytosolic arginine sensor for mTORC1 subunit 1.
    
 
 0.529
Lrrtm2
Leucine-rich repeat transmembrane neuronal protein 1/2.
      
 0.493
Thnsl2
Threonine synthase-like 2 isoform X1.
      
 0.441
Zkscan17
KRAB and SCAN domains-containing zinc finger protein.
    
 
 0.420
Adat2
TRNA-specific adenosine deaminase 2.
      
 0.404
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.