STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sall4Sal-like protein 4 isoform X1. (1060 aa)    
Predicted Functional Partners:
Nanog
Homeobox protein NANOG isoform X1.
   
 0.995
ENSMUGP00000002601
annotation not available
   
 0.936
ENSMUGP00000015808
annotation not available
   
 0.936
Pou5f1
POU domain, class 5, transcription factor 1.
   
 0.936
Sox2
Transcription factor SOX2 (SOX group B).
   
 0.921
Nr0b1
Nuclear receptor subfamily 0 group B member 1.
    
 0.795
Esrrb
Estrogen-related receptor beta.
    
 0.766
Tfcp2l1
Transcription factor CP2 and related proteins.
    
 
 0.734
Pou5f2
POU domain, class 5, transcription factor 2.
   
 0.732
Rbbp4
Histone-binding protein RBBP4.
   
 0.721
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.