STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OtofOtoferlin isoform X1. (1998 aa)    
Predicted Functional Partners:
Syt4
Synaptotagmin-4.
   
  
 0.845
Ctbp2
C-terminal-binding protein 2 isoform X1.
     
 0.803
Slc17a8
Vesicular glutamate transporter 3.
     
 0.779
Syt2
Synaptotagmin-2.
   
  
 0.765
Syt1
Synaptotagmin-1.
      
 0.733
Rab3a
Ras-related protein Rab-3A.
   
 
 0.649
Syp
Synaptophysin.
   
 
 0.640
Vamp2
Vesicle-associated membrane protein 2.
     
 0.616
Kcnq4
Potassium voltage-gated channel KQT-like subfamily member 4.
   
  
 0.579
Tmc1
Transmembrane channel-like protein 1.
   
  
 0.539
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.