STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEC17144.1D-allose transporter subunit. (312 aa)    
Predicted Functional Partners:
AEC16800.1
Aerobic respiration control sensor protein ArcB.
  
 
 0.999
AEC17146.1
D-allose transporter subunit; Belongs to the binding-protein-dependent transport system permease family.
 0.989
AEC17145.1
D-allose transporter ATP-binding protein.
 
 0.978
AEC17538.1
Ribose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.906
rbsD
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.868
rbsA
D-ribose transporter ATP binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 
 0.837
xylG
Xylose transporter ATP-binding subunit; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
 
 
 0.785
AEC16601.1
Ribose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.772
AEC17143.1
DNA-binding transcriptional repressor RpiR.
  
    0.764
AEC17916.1
Beta-methylgalactoside transporter inner membrane component; Belongs to the binding-protein-dependent transport system permease family.
  
 0.764
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis UMN179, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179
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