STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO02986.1Histidine kinase. (452 aa)    
Predicted Functional Partners:
SFO19337.1
PAS/PAC sensor hybrid histidine kinase.
 0.885
SFN37813.1
Two-component system, OmpR family, phosphate regulon response regulator PhoB.
 
 
  0.877
SFN36258.1
PAS domain S-box-containing protein.
 
0.860
SFN53964.1
Hypothetical protein.
 
0.844
SFO33797.1
Response regulator receiver domain-containing protein.
  
 
  0.812
SFO33772.1
Response regulator receiver domain-containing protein.
  
 
  0.811
SFO33668.1
Response regulator receiver domain-containing protein.
  
 
  0.809
SFO22240.1
Response regulator receiver domain-containing protein.
  
 
  0.794
SFO30394.1
Response regulator receiver protein.
  
 
  0.772
SFO02968.1
N-acyl-L-homoserine lactone synthetase; Belongs to the autoinducer synthase family.
 
 
  0.734
Your Current Organism:
Roseovarius lutimaris
NCBI taxonomy Id: 1005928
Other names: DSM 28463, JCM 17743, KACC 16185, R. lutimaris, Roseovarius lutimaris Choi et al. 2013, Roseovarius sp. 112, strain 112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.