STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI82889.1Hypothetical protein. (455 aa)    
Predicted Functional Partners:
SFI82929.1
Glycosyltransferase, GT2 family.
 
    0.953
SFI52205.1
Hypothetical protein.
  
 
 
 0.650
SFH74080.1
Protein of unknown function.
  
     0.641
SFI82544.1
Sporulation and spore germination.
 
     0.637
SFI13442.1
DNA gyrase subunit B.
  
 
 
 0.617
SFH77679.1
Protein of unknown function.
  
     0.616
SFI21319.1
Alanine racemase.
  
     0.608
SFI83065.1
Protein of unknown function.
 
     0.603
SFI13617.1
Hypothetical protein.
  
     0.601
SFH92290.1
LytR cell envelope-related transcriptional attenuator.
  
     0.590
Your Current Organism:
Nocardioides psychrotolerans
NCBI taxonomy Id: 1005945
Other names: CGMCC 1.11156, N. psychrotolerans, NBRC 108563, Nocardioides psychrotolerans Liu et al. 2013, Nocardioides sp. CGMCC 1.11156, strain RHLT2-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.