STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GKAS_03733Sigma-fimbriae tip adhesin. (160 aa)    
Predicted Functional Partners:
GKAS_03732
Sigma-fimbriae chaperone protein.
 
   0.955
GKAS_03731
Sigma-fimbriae usher protein; Protein involved in transporter activity and transport.
 
  
 0.892
GKAS_03730
Sigma-fimbriae tip adhesin.
 
     0.885
GKAS_01681
Sigma-fimbriae chaperone protein.
  
   0.847
GKAS_03413
Sigma-fimbriae chaperone protein.
  
   0.845
GKAS_03412
Sigma-fimbriae usher protein; Protein involved in transporter activity and transport.
 
  
 0.783
GKAS_01682
Sigma-fimbriae usher protein; Protein involved in transporter activity and transport.
 
  
 0.782
GKAS_01683
Sigma-fimbriae tip adhesin.
  
     0.773
GKAS_03411
Sigma-fimbriae tip adhesin.
  
     0.773
GKAS_03414
Sigma-fimbriae tip adhesin.
  
     0.773
Your Current Organism:
Kluyvera ascorbata
NCBI taxonomy Id: 1006000
Other names: K. ascorbata ATCC 33433, Kluyvera ascorbata ATCC 33433, Kluyvera ascorbata CDC 0648/74, Kluyvera ascorbata CIP 82.95, Kluyvera ascorbata DSM 4611, Kluyvera ascorbata str. ATCC 33433, Kluyvera ascorbata strain ATCC 33433
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.