STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GBAG_0122Protein involved in biological_process. (106 aa)    
Predicted Functional Partners:
GBAG_0121
Addiction module antidote protein; Protein involved in DNA binding.
 
  
 0.955
GBAG_0959
Protein involved in DNA binding and biological_process.
 
  
 0.775
GBAG_0934
HigA family protein; Protein involved in sequence-specific DNA binding and DNA binding.
 
     0.560
rluF
Protein involved in RNA binding, pseudouridine synthase activity, intramolecular transferase activity, enzyme-directed rRNA pseudouridine synthesis, pseudouridine synthesis and RNA modification; Belongs to the pseudouridine synthase RsuA family.
       0.511
GBAG_0178
Acetyltransferase; FIG001353; Protein involved in N-acetyltransferase activity and metabolic process.
  
     0.445
GBAG_1607
Protein involved in sequence-specific DNA binding and DNA binding.
 
     0.408
GBAG_2363
FIG00639005; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated.
  
     0.403
Your Current Organism:
Buttiauxella agrestis
NCBI taxonomy Id: 1006004
Other names: B. agrestis ATCC 33320, Buttiauxella agrestis ATCC 33320, Buttiauxella agrestis CDC 11786-81, Buttiauxella agrestis CIP 80.31, Buttiauxella agrestis CUETM 77-167, Buttiauxella agrestis DSM 4586, Buttiauxella agrestis str. ATCC 33320, Buttiauxella agrestis strain ATCC 33320
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.