STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ygiNQuinol monooxygenase; FIG00896075; Protein involved in oxidation-reduction process and antibiotic biosynthetic process. (105 aa)    
Predicted Functional Partners:
GBAG_0528
Modulator of drug activity B.
     
 0.746
ypfG
Putative exported protein; Protein involved in biological_process.
  
     0.723
mliC
Membrane-bound c-type lysozyme inhibitor.
  
     0.690
GBAG_2034
Hypothetical protein; FIG01220641.
  
    0.681
GBAG_1565
Osmotically-inducible lipoprotein E.
  
     0.675
GBAG_1486
Putative outer membrane protein; Protein involved in response to stress and biofilm formation.
  
     0.639
spy
Periplasmic protein.
  
     0.627
TomB
FIG00948312; Protein involved in biological_process.
  
     0.615
SseB
SseB family protein.
  
     0.613
GBAG_1484
Putative outer membrane protein; Protein involved in response to stress and biofilm formation.
  
     0.610
Your Current Organism:
Buttiauxella agrestis
NCBI taxonomy Id: 1006004
Other names: B. agrestis ATCC 33320, Buttiauxella agrestis ATCC 33320, Buttiauxella agrestis CDC 11786-81, Buttiauxella agrestis CIP 80.31, Buttiauxella agrestis CUETM 77-167, Buttiauxella agrestis DSM 4586, Buttiauxella agrestis str. ATCC 33320, Buttiauxella agrestis strain ATCC 33320
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