STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GBAG_0617Putative exported protein; Protein involved in biological_process. (567 aa)    
Predicted Functional Partners:
GBAG_0616
Protein involved in biological_process.
 
   
 0.951
ftsK
FtsK family cell division protein; Protein involved in nucleotide binding, DNA binding, ATP binding, (DEPRECATED) positive regulation of transcription, chromosome segregation, SOS response, cytokinetic cell separation, response to salt stress, cell cycle and cell division.
   
 
 0.696
GBAG_1568
Putative exported protein.
 
    0.654
ybhC
Pectinesterase; Protein involved in pectinesterase activity and cell wall modification.
  
   
 0.604
ydcK
Putative transferase; FIG005189.
  
  
 0.584
yfhG
Putative alpha helix protein; Protein involved in biological_process.
    
 
 0.563
GBAG_1121
Protein involved in phosphorelay sensor kinase activity, signal transducer activity, ATP binding and signal transduction.
  
   
 0.512
GBAG_2948
Putative exported protein.
  
     0.512
GBAG_0266
Outer membrane protein.
  
   
 0.495
GBAG_0256
Protein involved in biological_process.
 
  
 0.490
Your Current Organism:
Buttiauxella agrestis
NCBI taxonomy Id: 1006004
Other names: B. agrestis ATCC 33320, Buttiauxella agrestis ATCC 33320, Buttiauxella agrestis CDC 11786-81, Buttiauxella agrestis CIP 80.31, Buttiauxella agrestis CUETM 77-167, Buttiauxella agrestis DSM 4586, Buttiauxella agrestis str. ATCC 33320, Buttiauxella agrestis strain ATCC 33320
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.