STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GBAG_0714Gamma-glutamyltranspeptidase; Protein involved in gamma-glutamyltransferase activity and glutathione metabolic process. (528 aa)    
Predicted Functional Partners:
HpxZ
FIG00441296; Protein involved in biological_process.
 
   
 0.888
GBAG_0712
Amidotransferase/amidase; Protein involved in carbon-nitrogen ligase activity, with glutamine as amido-N-donor.
 
    0.827
GBAG_0713
Protein involved in biological_process.
       0.786
GBAG_0715
Putative RpiR family transcriptional regulator; Protein involved in carbohydrate binding, sequence-specific DNA binding transcription factor activity, DNA binding, carbohydrate metabolic process and regulation of transcription, DNA-templated.
 
     0.641
pucG
Serine--pyruvate aminotransferase/L-alanine:glyoxylate aminotransferase; Protein involved in purine nucleobase metabolic process and metabolic process.
 
     0.608
uraD
N-carbamoyl-L-amino acid hydrolase; Protein involved in hydrolase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines, urate catabolic process and metabolic process.
 
   
 0.539
Your Current Organism:
Buttiauxella agrestis
NCBI taxonomy Id: 1006004
Other names: B. agrestis ATCC 33320, Buttiauxella agrestis ATCC 33320, Buttiauxella agrestis CDC 11786-81, Buttiauxella agrestis CIP 80.31, Buttiauxella agrestis CUETM 77-167, Buttiauxella agrestis DSM 4586, Buttiauxella agrestis str. ATCC 33320, Buttiauxella agrestis strain ATCC 33320
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