STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybbWAllantoin permease; Protein involved in nucleobase transmembrane transporter activity, transporter activity, purine nucleobase metabolic process, nucleobase transport and transport. (487 aa)    
Predicted Functional Partners:
allB
Allantoinase; Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring; Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family.
 
  
 0.945
ybbY
Xanthine permease; Protein involved in transporter activity, transmembrane transport and transport.
 
  
 0.814
allC
Allantoate amidohydrolase; Protein involved in hydrolase activity, manganese ion binding, protein homodimerization activity, allantoate deiminase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines, allantoin assimilation pathway, metabolic process and allantoin catabolic process.
 
  
 0.774
ylbA
Ureidoglycine aminohydrolase; Protein involved in biological_process.
 
     0.760
allD
Ureidoglycolate dehydrogenase; Protein involved in oxidoreductase activity, metabolic process and oxidation-reduction process; Belongs to the LDH2/MDH2 oxidoreductase family.
 
    0.675
uraD
N-carbamoyl-L-amino acid hydrolase; Protein involved in hydrolase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines, urate catabolic process and metabolic process.
 
  
 0.644
hyi
Hydroxypyruvate isomerase; Belongs to the hyi family.
 
    0.531
gcl
Glyoxylate carboligase; Protein involved in thiamine pyrophosphate binding, magnesium ion binding, catalytic activity, tartronate-semialdehyde synthase activity and glyoxylate catabolic process; Belongs to the TPP enzyme family.
 
    0.513
GBAG_0900
2-hydroxy-3-oxopropionate reductase; Protein involved in phosphogluconate dehydrogenase (decarboxylating) activity, 2-hydroxy-3-oxopropionate reductase activity, oxidoreductase activity, (DEPRECATED) D-galactarate metabolic process, pentose-phosphate shunt, oxidation-reduction process and glyoxylate metabolic process.
  
    0.506
fdrA
FdrA family protein; Protein involved in catalytic activity, cofactor binding and metabolic process.
 
  
 0.436
Your Current Organism:
Buttiauxella agrestis
NCBI taxonomy Id: 1006004
Other names: B. agrestis ATCC 33320, Buttiauxella agrestis ATCC 33320, Buttiauxella agrestis CDC 11786-81, Buttiauxella agrestis CIP 80.31, Buttiauxella agrestis CUETM 77-167, Buttiauxella agrestis DSM 4586, Buttiauxella agrestis str. ATCC 33320, Buttiauxella agrestis strain ATCC 33320
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