STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybdKGamma-glutamyl:cysteine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity. (372 aa)    
Predicted Functional Partners:
ggt
Gamma-glutamyltranspeptidase; Protein involved in gamma-glutamyltransferase activity, glutathione biosynthetic process and glutathione metabolic process.
 
  
 0.924
gshB
Protein involved in glutathione synthase activity, ATP binding and glutathione biosynthetic process; Belongs to the prokaryotic GSH synthase family.
    
 0.918
gshA
Protein involved in glutamate-cysteine ligase activity and glutathione biosynthetic process; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
     
 0.913
pepD
Aminoacyl-histidine dipeptidase; Protein involved in hydrolase activity, proteolysis, peptide catabolic process and metabolic process.
     
  0.900
GBAG_1208
Protein involved in aminopeptidase activity, metalloexopeptidase activity, manganese ion binding, proteolysis and protein metabolic process; Belongs to the peptidase M17 family.
     
  0.900
pepN
Membrane alanyl aminopeptidase; Protein involved in metallopeptidase activity, zinc ion binding and proteolysis.
     
  0.900
GBAG_2856
Allophanate hydrolase 2 subunit 2; Protein involved in peptidyl-prolyl cis-trans isomerase activity, biological_process and protein folding.
     
  0.900
GBAG_2857
Allophanate hydrolase 2 subunit 1; Protein involved in peptidyl-prolyl cis-trans isomerase activity and protein folding.
     
  0.900
pxpA
Lactam utilization protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
     
  0.900
pepB
Peptidase B; Probably plays an important role in intracellular peptide degradation.
     
  0.900
Your Current Organism:
Buttiauxella agrestis
NCBI taxonomy Id: 1006004
Other names: B. agrestis ATCC 33320, Buttiauxella agrestis ATCC 33320, Buttiauxella agrestis CDC 11786-81, Buttiauxella agrestis CIP 80.31, Buttiauxella agrestis CUETM 77-167, Buttiauxella agrestis DSM 4586, Buttiauxella agrestis str. ATCC 33320, Buttiauxella agrestis strain ATCC 33320
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