STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GBAG_0980Protein involved in biological_process. (267 aa)    
Predicted Functional Partners:
GBAG_0981
Putative oxidoreductase subunit; Protein involved in cofactor binding, catalytic activity and metabolic process.
 
   0.965
GBAG_0982
Putative cytoplasmic protein; Protein involved in biological_process.
 
   0.962
fdrA
FdrA family protein; Protein involved in catalytic activity, cofactor binding and metabolic process.
 
   0.812
GBAG_0915
Putative cytoplasmic protein; Protein involved in biological_process.
 
   0.801
GBAG_0979
Putative transcription factor; Protein involved in protein binding.
 
    0.790
GBAG_0983
FIG00626576; Protein involved in biological_process.
       0.773
GBAG_0985
Putative deaminase; Protein involved in hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds.
 
     0.750
cpkA
Carbamate kinase; Protein involved in arginine metabolic process and cellular amino acid biosynthetic process; Belongs to the carbamate kinase family.
 
     0.654
ygjI
Putative oxidoreductase; Protein involved in amino acid transmembrane transporter activity and amino acid transmembrane transport.
  
     0.626
maoA
Monoamine oxidase; Protein involved in copper ion binding, primary amine oxidase activity, quinone binding, oxidation-reduction process, catecholamine metabolic process and amine metabolic process.
  
     0.616
Your Current Organism:
Buttiauxella agrestis
NCBI taxonomy Id: 1006004
Other names: B. agrestis ATCC 33320, Buttiauxella agrestis ATCC 33320, Buttiauxella agrestis CDC 11786-81, Buttiauxella agrestis CIP 80.31, Buttiauxella agrestis CUETM 77-167, Buttiauxella agrestis DSM 4586, Buttiauxella agrestis str. ATCC 33320, Buttiauxella agrestis strain ATCC 33320
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.