STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dpiBSensor kinase; Protein involved in ATP binding, phosphorelay sensor kinase activity, transferase activity, transferring phosphorus-containing groups, signal transducer activity, peptidyl-histidine phosphorylation, regulation of transcription, DNA-templated, protein autophosphorylation, phosphorelay signal transduction system and signal transduction. (553 aa)    
Predicted Functional Partners:
dpiA
CitB/DpiA family transcriptional regulator; Protein involved in phosphorelay response regulator activity, (DEPRECATED) transcription, regulation of transcription, DNA-templated and phosphorelay signal transduction system.
 
 0.998
citC
Citrate lyase ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.
 
   
 0.577
citX
Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; Protein involved in prosthetic group biosynthetic process.
 
     0.523
citD
Citrate lyase gamma chain, acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.
 
     0.523
citE
Citrate lyase beta chain; Protein involved in carbon-carbon lyase activity, citryl-CoA lyase activity, catalytic activity, fermentation, cellular aromatic compound metabolic process and acetyl-CoA metabolic process; Belongs to the HpcH/HpaI aldolase family.
 
   
 0.500
citT
Sodium:sulfate symporter; TC:2.A.47.3.2; Protein involved in transporter activity, sodium ion transport and transmembrane transport.
 
  
 0.482
citF
Citrate lyase alpha chain; Protein involved in citrate CoA-transferase activity, fermentation and acetyl-CoA metabolic process.
 
     0.477
citG
Protein involved in ATP binding, triphosphoribosyl-dephospho-CoA synthase activity, 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process and phosphorylation.
 
   
 0.466
barA
Sensory histidine kinase; Protein involved in signal transducer activity, ATP binding, phosphorelay response regulator activity, phosphorelay sensor kinase activity, peptidyl-histidine phosphorylation, regulation of transcription, DNA-templated, response to hydrogen peroxide, protein autophosphorylation, (DEPRECATED) transcription, signal transduction and phosphorelay signal transduction system.
  
   
 0.451
arcB
Aerobic respiration control sensor protein; Protein involved in phosphorelay response regulator activity, signal transducer activity, ATP binding, phosphorelay sensor kinase activity, peptidyl-histidine phosphorylation, regulation of transcription, DNA-templated, protein autophosphorylation, (DEPRECATED) transcription, phosphorelay signal transduction system and signal transduction.
  
  
0.417
Your Current Organism:
Buttiauxella agrestis
NCBI taxonomy Id: 1006004
Other names: B. agrestis ATCC 33320, Buttiauxella agrestis ATCC 33320, Buttiauxella agrestis CDC 11786-81, Buttiauxella agrestis CIP 80.31, Buttiauxella agrestis CUETM 77-167, Buttiauxella agrestis DSM 4586, Buttiauxella agrestis str. ATCC 33320, Buttiauxella agrestis strain ATCC 33320
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