STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lrpLeucine-responsive regulatory protein; Protein involved in sequence-specific DNA binding transcription factor activity, sequence-specific DNA binding, response to leucine and regulation of transcription, DNA-templated. (164 aa)    
Predicted Functional Partners:
ftsK
FtsK family cell division protein; Protein involved in nucleotide binding, DNA binding, ATP binding, (DEPRECATED) positive regulation of transcription, chromosome segregation, SOS response, cytokinetic cell separation, response to salt stress, cell cycle and cell division.
     
 0.536
putA
Transcriptional repressor/proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
     
 0.500
gltB
Glutamate synthase [NADPH] large chain; Protein involved in glutamate synthase activity, oxidoreductase activity, acting on the CH-NH2 group of donors, oxidoreductase activity, glutamine metabolic process, glutamate biosynthetic process, oxidation-reduction process, metabolic process and nitrogen compound metabolic process.
     
 0.498
nadR
HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes; Protein involved in sequence-specific DNA binding, DNA binding, catalytic activity, transport, pyridine nucleotide biosynthetic process, (DEPRECATED) transcription, regulation of transcription, DNA-templated and biosynthetic process.
   
  
 0.444
lolA
Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
    0.401
Your Current Organism:
Buttiauxella agrestis
NCBI taxonomy Id: 1006004
Other names: B. agrestis ATCC 33320, Buttiauxella agrestis ATCC 33320, Buttiauxella agrestis CDC 11786-81, Buttiauxella agrestis CIP 80.31, Buttiauxella agrestis CUETM 77-167, Buttiauxella agrestis DSM 4586, Buttiauxella agrestis str. ATCC 33320, Buttiauxella agrestis strain ATCC 33320
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