STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GBAG_1290FIG00613574; Protein involved in biological_process. (585 aa)    
Predicted Functional Partners:
nfsA
Oxygen-insensitive NADPH nitroreductase; Protein involved in oxidoreductase activity and oxidation-reduction process; Belongs to the flavin oxidoreductase frp family.
  
  
 0.591
rutE
Putative reductase; May reduce toxic product malonic semialdehyde to 3- hydroxypropionic acid, which is excreted.
  
  
 0.591
ydjA
YdjA family protein; Protein involved in oxidoreductase activity and oxidation-reduction process.
  
  
 0.591
nfnB
Oxygen-insensitive NAD(P)H nitroreductase/dihydropteridine reductase; Protein involved in oxidoreductase activity and oxidation-reduction process.
  
  
 0.591
GBAG_1291
Putative inner membrane protein; Protein involved in biological_process.
       0.533
yadH
Permease component of an ABC superfamily multidrug transporter.
  
  
 0.526
ybhR
Permease component of an ABC superfamily transporter; Protein involved in cellular response to DNA damage stimulus.
  
  
 0.526
ybhS
Permease component of an ABC superfamily transporter.
  
  
 0.526
GBAG_1500
FIG002776; Protein involved in protein binding.
 
   
 0.501
GBAG_1202
FIG002776; Protein involved in protein binding.
 
   
 0.485
Your Current Organism:
Buttiauxella agrestis
NCBI taxonomy Id: 1006004
Other names: B. agrestis ATCC 33320, Buttiauxella agrestis ATCC 33320, Buttiauxella agrestis CDC 11786-81, Buttiauxella agrestis CIP 80.31, Buttiauxella agrestis CUETM 77-167, Buttiauxella agrestis DSM 4586, Buttiauxella agrestis str. ATCC 33320, Buttiauxella agrestis strain ATCC 33320
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.