Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FtrA | GBAG_1811 | GBAG_1810 | GBAG_1811 | AraC family transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity, sequence-specific DNA binding, DNA binding and regulation of transcription, DNA-templated. | Rhodanese family sulfurtransferase. | 0.861 |
FtrA | GBAG_1812 | GBAG_1810 | GBAG_1812 | AraC family transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity, sequence-specific DNA binding, DNA binding and regulation of transcription, DNA-templated. | Protein involved in biological_process. | 0.496 |
GBAG_1811 | FtrA | GBAG_1811 | GBAG_1810 | Rhodanese family sulfurtransferase. | AraC family transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity, sequence-specific DNA binding, DNA binding and regulation of transcription, DNA-templated. | 0.861 |
GBAG_1811 | GBAG_1812 | GBAG_1811 | GBAG_1812 | Rhodanese family sulfurtransferase. | Protein involved in biological_process. | 0.634 |
GBAG_1812 | FtrA | GBAG_1812 | GBAG_1810 | Protein involved in biological_process. | AraC family transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity, sequence-specific DNA binding, DNA binding and regulation of transcription, DNA-templated. | 0.496 |
GBAG_1812 | GBAG_1811 | GBAG_1812 | GBAG_1811 | Protein involved in biological_process. | Rhodanese family sulfurtransferase. | 0.634 |
GBAG_1812 | gst | GBAG_1812 | GBAG_2129 | Protein involved in biological_process. | Glutathione S-transferase; Protein involved in protein binding; Belongs to the GST superfamily. | 0.440 |
gst | GBAG_1812 | GBAG_2129 | GBAG_1812 | Glutathione S-transferase; Protein involved in protein binding; Belongs to the GST superfamily. | Protein involved in biological_process. | 0.440 |