STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GBAG_1822Inosose isomerase. (352 aa)    
Predicted Functional Partners:
GBAG_1823
Oxidoreductase; Protein involved in oxidoreductase activity, metabolic process and oxidation-reduction process.
 
  
 0.966
GBAG_1821
Protein involved in oxidoreductase activity.
 
  
 0.909
GBAG_1820
Nucleoside permease.
 
  
 0.878
xylA
Protein involved in xylose isomerase activity, pentose-phosphate shunt and D-xylose metabolic process; Belongs to the xylose isomerase family.
 
   
 0.528
GBAG_1819
LacI family transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity, DNA binding and regulation of transcription, DNA-templated.
  
    0.515
kdgK
2-dehydro-3-deoxygluconate kinase.
 
  
 0.406
Your Current Organism:
Buttiauxella agrestis
NCBI taxonomy Id: 1006004
Other names: B. agrestis ATCC 33320, Buttiauxella agrestis ATCC 33320, Buttiauxella agrestis CDC 11786-81, Buttiauxella agrestis CIP 80.31, Buttiauxella agrestis CUETM 77-167, Buttiauxella agrestis DSM 4586, Buttiauxella agrestis str. ATCC 33320, Buttiauxella agrestis strain ATCC 33320
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.